SubtiBank SubtiBank
yddT [2017-8-11 16:0:3]
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yddT [2017-8-11 16:0:3]

unknown
locus
BSU05100
pI
9.55
mw
25.31 kDa
protein length
228 aa Sequence Blast
gene length
684 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycUniProt

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    556,762 → 557,449

    Protein

    Paralogous protein(s)

  • [protein|25ACC4472A56ABF9F0FCA75CC24579FBC59E4C2F|YomL] (the two proteins differ in only 4 out of 228 amino acids)

    • Expression and Regulation

    Operons

    genes
    [gene|D04CF5261C840E9A1BC7FFE5B6F492A46EC0971C|yddT]
    description
    [Pubmed|20817675]

    regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]
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    Biological material

    Mutant

  • MGNA-C164 (yddT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2162 NBRP B. subtilis, Japan]
  • BP116 (yddT::spc), available in[SW|Fabian Commichau]'s lab [Pubmed|24178028]

    • Expression vector

  • IPTG inducible expression of Strep-yddT in E. coli: [SW|pGP2581] (in pGP172), available in [SW|Jörg Stülke]'s lab

    • References

  • 17114254,23420519,20817675,24178028